Damping Off: Why Seedlings Fall Over and Die

On this page
  1. Here today, flat tomorrow
  2. What invites it
  3. Start clean
  4. Sow thin, let it breathe
  5. Damping off questions
  6. Regional notes
  7. Sources and further reading
  8. Keep a garden record
The short answer: seedlings that thin at the base, darken and topple over have damping off, caused by soil-borne fungi and fungus-like organisms. Collapsed seedlings will not recover; save the rest by letting the compost dry a little, improving air flow, and next time sowing thinly into fresh compost and clean trays.
Bean seedlings with stems rotted at soil level by Pythium damping off
Bean seedlings with stems rotted at soil level. Photo: “Pythium 5361373” by Howard F. Schwartz, Colorado State University, Bugwood.org, CC BY 3.0 us.

Here today, flat tomorrow

Pots of young seedlings on a greenhouse bench
Pots of seedlings on a greenhouse bench. Photo: “Greenhouse bench - Flickr - peganum (1)” by peganum from Small Dole, England, CC BY-SA 2.0.

Seedlings thin and darken at the base and topple, often spreading outward across a tray; seeds may also rot before they emerge. The culprits are Pythium, Rhizoctonia, Fusarium and Phytophthora.

What invites it

A seed tray crowded with sunflower sprouts
A seed tray crowded with sprouts. Photo: “Starr-130308-2035-Helianthus annuus-sprouts in seed tray-Hawea Pl Olinda-Maui” by Forest and Kim Starr, CC BY 3.0 us.

Wet compost, high humidity, poor air circulation and crowded sowings favour it. A tray sown thickly, covered and kept wet is the perfect setting.

Start clean

An empty seed tray with drainage holes, draining after washing
A washed seed tray draining. Photo by Simon Speed, CC0.

Use fresh, sterile seed compost, never garden soil, and clean trays and pots.

Sow thin, let it breathe

Cucumber seedlings growing in a module tray
Cucumber seedlings in a module tray. Photo by Pascal Kings, CC BY 4.0.

Sow thinly, take covers off once seeds have germinated, and keep air moving. Modules with one seedling each are easier to manage than a crowded tray.

Related problems: seeds not germinating, overwatering, why plants are not growing. Or go back to all garden problems.

Damping off questions

A tray of young cabbage seedlings in modules
Seedlings in modules. Photo by Kolforn (Kolforn) I'd appreciate if you could mail me (Kolforn@gmail.com) if you want to use this picture out of the Wik, CC BY-SA 4.0.
Can I save seedlings that have fallen over?

No; resow in fresh compost and clean trays.

Can I reuse the compost?

No. Use fresh sterile compost for seed sowing.

Regional notes

Rows of summer crops on an allotment
Vegetable plots in summer. Photo: “Trumpington Allotment Society” by John Sutton, CC BY-SA 2.0.

The problem is the same on both sides of the Atlantic; local advice and timing differ. Trusted local guides for this page:

More problems: all garden problems.

Sources and further reading

Facts on this page are summarised in our own words from the pages above; each is supported by at least two of them, or by one plus well-established growing science (noted in our research file). Every source was opened and checked on 23 October 2026.

Keep a garden record

A planned Global vegetable garden in full season with the printable garden planner open on the bench
The Global Vegetable Garden Planner, printable PDF.

Most problems come back to the same beds in the same weeks. A simple record of what grew where, and when trouble started, lets you get ahead of it next year. Sketch your beds in the free Vegetable Garden Layout Planner Tool, and keep sowing dates, problems and harvests in the Global Vegetable Garden Planner (printable PDF). Every crop we cover is in the vegetable growing guides.

Last reviewed:

SoilCommander Editorial Team — under the guidance of Nitin Sharma, Co-Founder

Every growing guide is checked against RHS, USDA Cooperative Extension, and other named horticultural authorities before publishing. How we check our facts.

Relevant next steps

Fix The Cause, Then Plan The Next Crop

Troubleshooting works best when you improve the growing conditions and record what changed for the next season.

Keep going

Gardening somewhere else?
Top tips for October
  • Plant garlic before hard frosts
  • Protect late salads with fleece
  • Store squash somewhere dry
  • Mulch empty beds
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